MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-320-P1d

Family name MIR-320 (all species)
Seed AAAGCUG
Species Cow (Bos taurus)
MiRBase ID bta-mir-320a-2
Paralogues Bta-Mir-320-P1c 
Orthologues Cfa-Mir-320  Cja-Mir-320-P1  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P1  Laf-Mir-320  Mml-Mir-320-P1  Mmr-Mir-320-P1d  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P1  Rno-Mir-320 
Node of Origin (locus) B. taurus
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037335.1: 69558101-69558154 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUUAUCCCGCGGCGUCUCGCUCCCCUCCGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGAAAAAGGAAGAGGGGAAGGGUCUAGGGGAGG
Get precursor sequence
Structure
        10          20         30        40        50      
UAUUUAUCCCGCGGCGU--|  GC   CCUC-         UU       C    CGG 
                   CUC  UCC     CGCCUUCUC  CCCGGUU UUCC   A
                   GAG  AGG     GCGGGAGAG  GGGUCGA AAGG   G
GGAGGGGAUCUGGGAAGGG^  A-   AAAAA         UU       A    GCU 
  110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-320-P1d_5p*
mirBase accessionNone
Sequence 
0- GCCUUCUCUUCCCGGUUCUUCC -22
Get sequence
Mature sequence

Bta-Mir-320-P1d_3p
mirBase accessionMIMAT0003534
Sequence 
32- AAAAGCUGGGUUGAGAGGGCGA -54
Get sequence
Proposed targets TargetScanVert: bta-miR-320a