MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-320-P3

Family name MIR-320 (all species)
Seed AAAGCUG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-320-P1  Pab-Mir-320-P2a  Pab-Mir-320-P2b  Pab-Mir-320-P4 
Orthologues Cfa-Mir-320  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P3  Laf-Mir-320  Mml-Mir-320-P3  Mmu-Mir-320  Ocu-Mir-320  Rno-Mir-320 
Node of Origin (locus) Catarrhini
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054696.2: 35882870-35882923 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGGAAAAUGUGUUUUGCAUUAAAAAUGAGGCCUUGUCUUCCCACUUCUUCCCAGAGUCAGGAAAAGCUGGGUUGAGAGGGUAGAAAAAAAAUGAUGUACGUGAAUAACUACUG
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Structure
        10           20        30        40         50      
AAGGAAAAUGUGUUUUG---|   AAAAAUGAG     G  UU    -   C    CAG 
                    CAUU         GCCUU UC  CCCA CUU UUCC   A
                    GUAA         UGGGA AG  GGGU GAA AAGG   G
GUCAUCAAUAAGUGCAUGUA^   AAAAAAGA-     G  UU    C   -    ACU 
  110       100        90         80        70         60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-320-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCCUUGUCUUCCCACUUCUUCC -22
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Mature sequence

Pab-Mir-320-P3_3p
mirBase accessionNone
Sequence 
32- AAAAGCUGGGUUGAGAGGGUAG -54
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