MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007687.1: 5500292-5500351 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCAUCAUUCAGAAAUGGUAUACAGGAAAUUGACCUAUGAACUGACAGACAAUGUGGCUAAGUUUGUCUGUCAUUUCUGUAGGCCAACGUUCUGUAUGUCUCUGCUACUUUAAAAAUCA
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Structure
        10          20        30         40        50         
AGUCAUCAUUCAGAAAU-- GU        AA   A     -|  C         AUGUGG 
                   G  AUACAGGA  UUG CCUAU GAA UGACAGACA      \
                   C  UAUGUCUU  AAC GGAUG CUU ACUGUCUGU      C
ACUAAAAAUUUCAUCGUCU UG        GC   C     U^  U         UUGAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-192-P2_5p

mirBase accessionNone
Sequence
0- UUGACCUAUGAACUGACAGACA -22
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Star sequence

Mmr-Mir-192-P2_3p*

mirBase accessionNone
Sequence
37- UCUGUCAUUUCUGUAGGCCAACG -60
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