MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-215
Paralogues Ami-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017708560.1: 13838078-13838138 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-192-P2)		 Mir-194-P2 NW_017708560.1: 13837764-13837819 [+] UCSC
Mir-192-P2 NW_017708560.1: 13838078-13838138 [+] UCSC
Precursor
(pre-Mir +30nt flank)
AUACAUUAAUGAGAACUGUUGUGCAGGAAAAUGACCUAUGAAUUGACAGACUGUGUAUUCUAAGCUUGUCUGUCAUUUCUGUAGGCCAAUAUUCUGCACACCUUCACUGCUCUGAUUCCAA
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Structure
        10          20        30         40        50         
AUACAUUAAUGAGAACUGU--         AAA  A     -|  U        UGUGUAU 
                     UGUGCAGGA   UG CCUAU GAA UGACAGAC       U
                     ACACGUCUU   AC GGAUG CUU ACUGUCUG       C
AACCUUAGUCUCGUCACUUCC         AUA  C     U^  U        UUCGAAU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ami-Mir-192-P2_5p
mirBase accessionMIMAT0038240
Sequence 
0- AUGACCUAUGAAUUGACAGACU -22
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Star sequence

Ami-Mir-192-P2_3p*
mirBase accessionMIMAT0038241
Sequence 
38- UCUGUCAUUUCUGUAGGCCAAUA -61
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