MirGeneDB 2.1

MirGeneDB ID

Cfa-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-192
Paralogues Cfa-Mir-192-P1 
Orthologues Ami-Mir-192-P2  Bta-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Dre-Mir-192-P2b  Ete-Mir-192-P2  Gja-Mir-192-P2  Gmo-Mir-192-P2b  Hsa-Mir-192-P2  Loc-Mir-192-P2  Mal-Mir-192-P2b  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Ocu-Mir-192-P2  Rno-Mir-192-P2  Sha-Mir-192-P2  Spt-Mir-192-P2  Tni-Mir-192-P2b-v1  Tni-Mir-192-P2b-v2  Xla-Mir-192-P2c  Xla-Mir-192-P2d  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)
chr18: 52281129-52281193 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGGCUGCUGAGAUCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUCUCAUCUCUCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGCCACCAGGA
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Structure
        10          20        30          40        50        60 
GCAGGCUGCUGAGAUCGA--   C   GG   C-        -|     A     AGUGCUCUC 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         A
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         U
AGGACCACCGACCGUAACUC   U   A-   AC        C^     C     UCUCCUCUC 
   120       110       100         90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-192-P2_5p

mirBase accessionMIMAT0006632
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
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Proposed targets TargetScanVert: cfa-miR-192
miRDB: MIMAT0006632
Star sequence

Cfa-Mir-192-P2_3p*

mirBase accessionNone
Sequence
43- CUGCCAAUUCCAUAGGUCACAG -65
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