MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01002633.1: 139138-139199 [-]
Precursor
(pre-Mir +30nt flank)
AUUUUAAUUAAGGUAAAGGUGUACAGGACAAUGACCUAUGAAUUGACAGCCAGUGCAAUUACAGAUUUGCCUGUCAGUUCCAUAGGCCACUAUUUUGUUCACCACAAUAUUGCAAAAAGUUC
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Structure
        10          20        30         40        50          
AUUUUAAUUAAGGUAAA--    U      CAA  A     -|         C  GUGCAAU 
                   GGUG ACAGGA   UG CCUAU GAAUUGACAG CA       \
                   CCAC UGUUUU   AC GGAUA CUUGACUGUC GU       U
CUUGAAAAACGUUAUAACA    U      AUC  C     C^         C  UUAGACA 
120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Sto-Mir-192-P2_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGCCA -22
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Star sequence

Sto-Mir-192-P2_3p*
mirBase accessionNone
Sequence 
39- CCUGUCAGUUCCAUAGGCCACUA -62
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