MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-215
Paralogues Rno-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 159423064: 546-604 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUCUCACCAUGACCGGUGUACAGGACAAUGACCUAUGAUUUGACAGACAGUGUGGCUGCGUGUGUCUGUCAUUCUGUAGGCCAAUAUUCUGUAUGUCUCUCCUCCUUACAAACCAG
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Structure
        10          20        30         40        50         
GGGCUCUCACCAUGACC-- GU        CAA  A     -| UU         GUGUGG 
                   G  GUACAGGA   UG CCUAU GA  UGACAGACA      \
                   C  UAUGUCUU   AC GGAUG CU  ACUGUCUGU      C
GACCAAACAUUCCUCCUCU UG        AUA  C     U^ U-         GUGCGU 
       110       100        90        80         70        60
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-192-P2_5p
mirBase accessionMIMAT0003118
Sequence 
0- AUGACCUAUGAUUUGACAGACA -22
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Proposed targets microrna.org: MIMAT0003118
TargetScanVert: rno-miR-215
miRDB: MIMAT0003118
Star sequence

Rno-Mir-192-P2_3p*
mirBase accessionNone
Sequence 
37- UCUGUCAUUCUGUAGGCCAAUA -59
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