MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-192-P4

Family name MIR-192 (all species)
Seed UGACCUA
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-192
Paralogues Rno-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Tni-Mir-192-P4b-v2  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr1: 221634994-221635058 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4)		 Mir-194-P4 chr1: 221634800-221634857 [+] UCSC Ensembl
Mir-192-P4 chr1: 221634994-221635058 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGGCUGUCAAGAUGGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUACUCUGAUCUCGCCUCUGGCUGCCAGUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGCCAUAAUGA
Get precursor sequence
Structure
        10          20        30          40        50        60 
GCAGGCUGUCAAGAUGGA--   C   GG   C-        -|     A     AGUACUCUG 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         A
                    CGC UGU  UGG  ACUGGAUA CUUGAC GUCGG         U
AGUAAUACCGACCGUAACUC   U   A-   AC        C^     C     UCUCCGCUC 
   120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-192-P4_5p
mirBase accessionMIMAT0000867
Sequence 
0- CUGACCUAUGAAUUGACAGCC -21
Get sequence
Proposed targets microrna.org: MIMAT0000867
TargetScanVert: rno-miR-192-5p
miRDB: MIMAT0000867
Star sequence

Rno-Mir-192-P4_3p*
mirBase accessionMIMAT0017147
Sequence 
43- CUGCCAGUUCCAUAGGUCACAG -65
Get sequence
Proposed targets TargetScanVert: rno-miR-192-3p
miRDB: MIMAT0017147