MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-192-P4

Family name MIR-192 (all species)
Seed UGACCUA
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-192
Paralogues Cpi-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Tni-Mir-192-P4b-v2  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584847: 983412-983475 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4)		 Mir-194-P4 JH584847: 982519-982578 [+] UCSC Ensembl
Mir-192-P4 JH584847: 983412-983475 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCCCCCCAAGACCCAGUGCACAGGACUAUGACCUAUGAAUUGACAGCCAGUCCUUCUGCCGCGCCCUGGCUGUCAGUUCUGUAGGGCACAGGUAUGUUCACCUCCAUGACCUCGGCAUGGC
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Structure
        10          20        30         40        50        60 
GCAGCCCCCCAAGACCCA--   C   GGA  A  A     -|           AGUCCUUCU 
                    GUG ACA   CU UG CCUAU GAAUUGACAGCC         \
                    CAC UGU   GA AC GGAUG CUUGACUGUCGG         G
CGGUACGGCUCCAGUACCUC   U   AUG  C  G     U^           UCCCGCGCC 
  120       110       100        90        80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-192-P4_5p
mirBase accessionMIMAT0037807
Sequence 
0- AUGACCUAUGAAUUGACAGCC -21
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Star sequence

Cpi-Mir-192-P4_3p*
mirBase accessionMIMAT0037808
Sequence 
42- CUGUCAGUUCUGUAGGGCACAG -64
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