MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-192-P4b-v2

Family name MIR-192 (all species)
Seed GACCUAU
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-192
Paralogues Tni-Mir-192-P4b-v1 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Xtr-Mir-192-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 7: 7655512-7655570 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4b-v2)		 Mir-194-P4b 7: 7655331-7655389 [+] UCSC Ensembl
Mir-192-P4b-v1 7: 7655511-7655571 [+] UCSC Ensembl
Mir-192-P4b-v2 7: 7655512-7655570 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGUCGCGGCCGUCCUGGGACACGAGGUGAUGACCUAUGAAUUGACAGCCAGUAACUGGAGCCUCUGCCUGUCAGUUCUGUAGGCCACUGCUGCGUCCGUCCCCCUUCUCUACCUGCUC
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Structure
        10            20         30         40        50        
CGGUCGCGGCCGUCCUG----    A  A-|   AUGA     -          C  GUAACU 
                     GGAC CG  GGUG    CCUAU GAAUUGACAG CA      G
                     CCUG GU  UCAC    GGAUG CUUGACUGUC GU      G
CUCGUCCAUCUCUUCCCCCUG    C  CG^   C---     U          C  CUCCGA 
       110       100        90           80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-192-P4b-v2_5p
mirBase accessionMIMAT0002942
Sequence 
0- UGACCUAUGAAUUGACAGCCA -21
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Star sequence

Tni-Mir-192-P4b-v2_3p*
mirBase accessionNone
Sequence 
37- CCUGUCAGUUCUGUAGGCCACU -59
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