MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-192-P4

Family name MIR-192 (all species)
Seed UGACCUA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-192
Paralogues Oan-Mir-192-P2  Oan-Mir-192-P2-as 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Tni-Mir-192-P4b-v2  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041730.1: 7220148-7220211 [+]
Clustered miRNAs
(< 50kb from Mir-192-P4)
Mir-194-P4 NC_041730.1: 7219904-7219961 [+]
Mir-192-P4 NC_041730.1: 7220148-7220211 [+]
Precursor
(pre-Mir +30nt flank)
GCCCCUCGGAGAGAGAGAGCGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUUCUCUCUGACCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAAGCCAGCAGCGAGGA
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Structure
        10          20        30          40        50        60 
GCCCCUCGGAGAGAGAGA--   C   GG   C-        -|     A     AGUUCUCUC 
                    GCG ACA  GCU  UGACCUAU GAAUUG CAGCC         \
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         U
AGGAGCGACGACCGAAACUC   U   A-   AC        C^     C     UCUCCCCAG 
  120       110       100         90        80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-192-P4_5p

mirBase accessionMIMAT0007016
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
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Star sequence

Oan-Mir-192-P4_3p*

mirBase accessionMIMAT0007017
Sequence
42- CUGCCAAUUCCAUAGGUCACAG -64
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