MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-192-P4d

Family name MIR-192 (all species)
Seed UGACCUA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xla-Mir-192-P4c 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Xtr-Mir-192-P4 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030731.1: 2843983-2844043 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAACAGAGAGGAAGCGAGUGUACGGGCCUAUGACCUAUGAAUUGACAGCUAGUGGAUGUACAGUCUGACUGUCAGUUCUGUAGGGCACAGGUUCGUCCACCUUAUUGCUAUACACAUAAA
Get precursor sequence
Structure
        10          20        30         40        50         
AAAACAGAGAGGAAGCGA--   U        A  A     -|         C  GUGGAU 
                    GUG ACGGGCCU UG CCUAU GAAUUGACAG UA      G
                    CAC UGCUUGGA AC GGAUG CUUGACUGUC GU      U
AAAUACACAUAUCGUUAUUC   C        C  G     U^         A  CUGACA 
 .       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-192-P4d_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGCUA -22
Get sequence
Star sequence

Xla-Mir-192-P4d_3p*
mirBase accessionNone
Sequence 
38- ACUGUCAGUUCUGUAGGGCACAG -61
Get sequence