MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-192-P4

Family name MIR-192 (all species)
Seed UGACCUA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Tni-Mir-192-P4b-v2  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021925.1: 118727318-118727382 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGGGCUGCCGAGACCGAGUGCACAAGGCUCUGACCUAUGAGUUGACAGCCAGUGCUCUGGUCUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGCCACCAGGA
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Structure
        10          20        30          40        50        60 
GCGGGCUGCCGAGACCGA--   C   AG   C-        -|     A     AGUGCUCUG 
                    GUG ACA  GCU  UGACCUAU GAGUUG CAGCC         G
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         U
AGGACCACCGACCGUAACUC   U   A-   AC        C^     C     UCUCCCCUC 
   120       110       100         90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-192-P4_5p
mirBase accessionNone
Sequence 
0- CUGACCUAUGAGUUGACAGCC -21
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Star sequence

Cja-Mir-192-P4_3p*
mirBase accessionNone
Sequence 
43- CUGCCAAUUCCAUAGGUCACAG -65
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