MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-192-P4

Family name MIR-192 (all species)
Seed UGACCUA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-192
Paralogues Mml-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Tni-Mir-192-P4b-v2  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014349.1: 9645154-9645218 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4)
Mir-194-P4 CM014349.1: 9644952-9645009 [+] UCSC Ensembl
Mir-192-P4 CM014349.1: 9645154-9645218 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGGCUGCUGAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUCUCGUCUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGCCACCAGGA
Get precursor sequence
Structure
        10          20        30          40        50        60 
GUGGGCUGCUGAGACCGA--   C   GG   C-        -|     A     AGUGCUCUC 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         G
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         U
AGGACCACCGACCGUAACUC   U   A-   AC        C^     C     UCUCCCCUC 
   120       110       100         90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-192-P4_5p

mirBase accessionMIMAT0006224
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
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Proposed targets TargetScanVert: mml-miR-192-5p
Star sequence

Mml-Mir-192-P4_3p*

mirBase accessionMIMAT0026835
Sequence
43- CUGCCAAUUCCAUAGGUCACAG -65
Get sequence
Proposed targets TargetScanVert: mml-miR-192-3p