| MirGeneDB ID | Bta-Mir-192-P4 |
|---|---|
| Family name | MIR-192 (all species) |
| Seed | UGACCUA |
| Species | Cow (Bos taurus) |
| MiRBase ID | bta-mir-192 |
| Paralogues | Bta-Mir-192-P2 |
| Orthologues | Ami-Mir-192-P4 Cfa-Mir-192-P4 Cja-Mir-192-P4 Cpi-Mir-192-P4 Cpo-Mir-192-P4 Dno-Mir-192-P4 Dre-Mir-192-P4b Eca-Mir-192-P4 Ete-Mir-192-P4 Gja-Mir-192-P4 Gmo-Mir-192-P4b Hsa-Mir-192-P4 Loc-Mir-192-P4 Mal-Mir-192-P4b Mml-Mir-192-P4 Mmr-Mir-192-P4 Mmu-Mir-192-P4 Mun-Mir-192-P4 Neu-Mir-192-P4 Oan-Mir-192-P4 Ocu-Mir-192-P4 Pab-Mir-192-P4 Rno-Mir-192-P4 Sha-Mir-192-P4 Spt-Mir-192-P4 Tni-Mir-192-P4b-v1 Tni-Mir-192-P4b-v2 Xla-Mir-192-P4c Xla-Mir-192-P4d Xtr-Mir-192-P4 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037356.1: 43114370-43114434 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-192-P4) |
Mir-192-P4
NC_037356.1: 43114370-43114434 [-]
UCSC
Ensembl
Mir-194-P4 NC_037356.1: 43114583-43114639 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAGGCUGCCAAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUCUUGUGUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGCCACCAGGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCAGGCUGCCAAGACCGA-- C GG C- -| A AGUGCUCUU GUG ACA GCU UGACCUAU GAAUUG CAGCC G CGC UGU UGG ACUGGAUA CUUAAC GUCGG U AGGACCACCGACCGUAACUC U A- AC C^ C UCUCCCCUG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Yes |
| Motifs | No |
| Mature sequence | Bta-Mir-192-P4_5p |
| mirBase accession | MIMAT0003820 |
| Sequence |
0- CUGACCUAUGAAUUGACAGCC -21
Get sequence
|
| Proposed targets |
TargetScanVert: bta-miR-192 |
| Star sequence | Bta-Mir-192-P4_3p* |
| mirBase accession | None |
| Sequence |
43- CUGCCAAUUCCAUAGGUCACAG -65
Get sequence
|
