MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-194-P4

Family name MIR-194 (all species)
Seed GUAACAG
Species Cow (Bos taurus)
MiRBase ID bta-mir-194-2
Paralogues Bta-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037356.1: 43114583-43114639 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-192-P4 NC_037356.1: 43114370-43114434 [-] UCSC Ensembl
Mir-194-P4 NC_037356.1: 43114583-43114639 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCCAGGCCUCCAACUGGCUCCCACCCCCUGUAACAGCAACUCCAUGUGGAAGUACCUCUAGUUCCAGUGGGGCUGCUGUUAUCUGGGGUGGGGGCCACGCCCACGGAGGAGGCAA
Get precursor sequence
Structure
        10          20        30        40        50        
GGCCCAGGCCUCCAACU--|           CU         A      G     GUAC 
                   GGCUCCCACCCC  GUAACAGCA CUCCAU UGGAA    C
                   CCGGGGGUGGGG  UAUUGUCGU GGGGUG ACCUU    U
AACGGAGGAGGCACCCGCA^           UC         C      -     GAUC 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-194-P4_5p
mirBase accessionMIMAT0009254
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
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Proposed targets TargetScanVert: bta-miR-194
Star sequence

Bta-Mir-194-P4_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGGGCUGCUGUUAUCUG -57
Get sequence