MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-194-P4

Family name MIR-194 (all species)
Seed GUAACAG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-194
Paralogues
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)		 JH577683: 525829-525886 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-192-P4 JH577683: 525619-525682 [-] UCSC Ensembl
Mir-194-P4 JH577683: 525829-525886 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCCCUGCCUCCAGUCGGCCGCCGCCCCCUGUAACAGCAACUCCAUGUGGAAGUGCCCGCUGGUUCCAGUGGGGCUGCUGUUAUCCGGGGCGGGGGCCAGGCCCCGCGGAGGAGGAG
Get precursor sequence
Structure
        10          20        30        40        50         
GGGCCCUGCCUCCAGUC--|   G       CU         A      G     GUGCC 
                   GGCC CCGCCCC  GUAACAGCA CUCCAU UGGAA     \
                   CCGG GGCGGGG  UAUUGUCGU GGGGUG ACCUU     C
GAGGAGGAGGCGCCCCGGA^   G       CC         C      -     GGUCG 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Dno-Mir-194-P4_5p
mirBase accessionMIMAT0047725
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
Star sequence

Dno-Mir-194-P4_3p*
mirBase accessionMIMAT0047726
Sequence 
36- CCAGUGGGGCUGCUGUUAUCCG -58
Get sequence