MirGeneDB ID | Mun-Mir-194-P4 |
Family name |
MIR-194 (all species) |
Seed |
GUAACAG |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
Mun-Mir-194-P2
|
Orthologues |
Aca-Mir-194-P4
Ami-Mir-194-P4
Bta-Mir-194-P4
Cfa-Mir-194-P4
Cja-Mir-194-P4
Cpi-Mir-194-P4
Cpo-Mir-194-P4
Dno-Mir-194-P4
Dre-Mir-194-P4a
Dre-Mir-194-P4b
Eca-Mir-194-P4
Ete-Mir-194-P4
Gja-Mir-194-P4
Gmo-Mir-194-P4a
Gmo-Mir-194-P4b
Hsa-Mir-194-P4
Lch-Mir-194-P4
Loc-Mir-194-P4
Mal-Mir-194-P4a
Mal-Mir-194-P4b
Mml-Mir-194-P4
Mmr-Mir-194-P4
Mmu-Mir-194-P4
Neu-Mir-194-P4
Oan-Mir-194-P4
Ocu-Mir-194-P4
Pab-Mir-194-P4
Pbv-Mir-194-P4
Rno-Mir-194-P4
Sha-Mir-194-P4
Spt-Mir-194-P4
Sto-Mir-194-P4
Tni-Mir-194-P4a
Tni-Mir-194-P4b
Xla-Mir-194-P4c
Xla-Mir-194-P4d
Xtr-Mir-194-P4
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (Mun_miRNA_loci) |
194-P1_LR594642.1:122927547-122927691: 45-101 [-]
|
Precursor (pre-Mir +30nt flank) |
UAUCCACUACUUAUCUCAGUGUCUAUUGCAUGUAACAGCAACUCCAUGUGGAAGGGUCUGUGUUUCCAGUGGAGCUGCUGUUAUUAUCCAUGGGCACCUAUGGACGACCCGAGAGAA
Get precursor sequence
|
Structure | 10 20 30 40 50
UAUCCACUACUUAUCUCA--| UGCAU A G GGGU
GUGUCUAU GUAACAGCA CUCCAU UGGAA C
CACGGGUA UAUUGUCGU GAGGUG ACCUU U
AAGAGAGCCCAGCAGGUAUC^ CCUAU C - UGUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mun-Mir-194-P4_5p |
mirBase accession | None |
Sequence |
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
|
Star sequence |
Mun-Mir-194-P4_3p* |
mirBase accession | None |
Sequence |
35- CCAGUGGAGCUGCUGUUAUUAU -57
Get sequence
|