MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-194-P4

Family name MIR-194 (all species)
Seed GUAACAG
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01056993.1: 2112-2167 [+]
Precursor
(pre-Mir +30nt flank)
ACUCGGUGCCGCCCCUUAGUGGCCAUCAGUUGUAACAGCAACUCCAUGUGGUGGUACUCUGAUCCCACUGGAGGUGCUGUUAUCUCUGACAGUCACGGCCAGCGACAGGGAGGAAU
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Structure
        10          20        30        40        50        
ACUCGGUGCCGCCCCUUA--|    CA    UU         A     U    UGGUAC 
                    GUGGC  UCAG  GUAACAGCA CUCCA GUGG      \
                    CACUG  AGUC  UAUUGUCGU GAGGU CACC      U
UAAGGAGGGACAGCGACCGG^    AC    UC         G     -    CUAGUC 
    110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGUG -23
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Star sequence

Sto-Mir-194-P4_3p* (predicted)
mirBase accessionNone
Sequence 
34- CCACUGGAGGUGCUGUUAUCUC -56
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