MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-194-P4a

Family name MIR-194 (all species)
Seed GUAACAG
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-194-P4b 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Xtr-Mir-194-P4 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 1: 8091282-8091346 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACGGGCUGUUUGCGUGGGUCUCGCCAGUUGUAACAGCAUCUCCAUAUGGAAAGAUCCACCCAGAGUGGGUUCCAGUGGGGCUGCUGUUAUCUAUGGAGGGACGCCGCUCGUCUUCAGCAAACU
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Structure
        10          20        30        40        50        60  
CCACGGGCUGUUUGCGU-  -|    G   GUU         U      A     AGAUCCAC 
                  GG GUCUC CCA   GUAACAGCA CUCCAU UGGAA        C
                  CC CAGGG GGU   UAUUGUCGU GGGGUG ACCUU        C
UCAAACGACUUCUGCUCG  G^    A   AUC         C      -     GGGUGAGA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-194-P4a_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAUCUCCAUAUGGAA -23
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Star sequence

Tni-Mir-194-P4a_3p*
mirBase accessionNone
Sequence 
43- CCAGUGGGGCUGCUGUUAUCUA -65
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