MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-194-P4

Family name MIR-194 (all species)
Seed GUAACAG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980369: 3027949-3028006 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGACCGAGCCUCUGAUGGGUUCCCGUCCCCUGUAACAGCAACUCCAUGUGGAGGUGCUCGCUGGUUCCAGUGGAGUUGCUGUUGCCUGGGGCGAGGGCCACGGCACACCGCACAGAGG
Get precursor sequence
Structure
        10          20        30        40        50         
GGACCGAGCCUCUGAUG--|    C      CU                G     GUGCU 
                   GGUUC CGUCCC  GUAACAGCAACUCCAU UGGAG     \
                   CCGGG GCGGGG  CGUUGUCGUUGAGGUG ACCUU     C
GGAGACACGCCACACGGCA^    A      UC                -     GGUCG 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ete-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAG -23
Get sequence
Star sequence

Ete-Mir-194-P4_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCAGUGGAGUUGCUGUUGCCUG -58
Get sequence