MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-194-P4

Family name MIR-194 (all species)
Seed GUAACAG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 AFEY01099922_Mir-192-P1_Mir-194-P1: 2424-2481 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAGGGGAGCCGCCGUGGCGCCCACCCCCUGUAACAGCAACUCCAUGUGGGACGGCUUCCUUCUUCCAGUGGGGGCGCUGUUACCUUGGGUGGGCAGCCCAGAUCCCGCAGAAAGAA
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Structure
        10         20         30        40        50         
AGGAGGGGAGCCGCCGU-   -|       CCU        AA      G    ACGGCU 
                  GGC GCCCACCC   GUAACAGC  CUCCAU UGGG      \
                  CCG CGGGUGGG   CAUUGUCG  GGGGUG ACCU      U
AAGAAAGACGCCCUAGAC   A^       UUC        CG      -    UCUUCC 
      110       100        90        80        70         60
Deep sequencing
CommentNot in assembly but in trace archive.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGGA -23
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Star sequence

Sha-Mir-194-P4_3p*
mirBase accessionNone
Sequence 
36- CCAGUGGGGGCGCUGUUACCUU -58
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