MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-194-P4

Family name MIR-194 (all species)
Seed GUAACAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID
Paralogues Ocu-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 Ocu-Mir-194-P1_pre_CM023772.1:234556212-234556357: 46-101 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCCCAGGCCUCCGGUUGGCUCCCACCCCCUGUAACAGCAACUCCAUGUGGAAUGCCCGUCUUUCCAGUGGGGCUGCUGUUAUCCGGGGCGGGCGCCGGUACCCACGGAGAAGAGG
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Structure
        10          20        30        40        50        
ACCCCAGGCCUCCGGUU--|  U   A    CU         A      G     UGCC 
                   GGC CCC CCCC  GUAACAGCA CUCCAU UGGAA    \
                   CCG GGG GGGG  UAUUGUCGU GGGGUG ACCUU    C
GGAGAAGAGGCACCCAUGG^  C   C    CC         C      -     UCUG 
    110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Ocu-Mir-194-P4_3p*
mirBase accessionNone
Sequence 
34- CCAGUGGGGCUGCUGUUAUCCG -56
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