MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-194
Paralogues Ocu-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr16: 52957890-52957947 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-194-P2 chr16: 52957890-52957947 [+] UCSC Ensembl
Mir-192-P2 chr16: 52958506-52958565 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUUCAACUUGUUUAAUGGAGUUAUCAAGUGUAACAGCAACUCCAUGUGGACUAUGUACCAAUUUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUACCAACUUGCUACAACAUAAAA
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Structure
        10         20         30        40        50         
UCUUUCAACUUGUUUAA-   -| UU      U         A      G    CUAUGU 
                  UGG AG  AUCAAG GUAACAGCA CUCCAU UGGA      \
                  ACC UU  UAGUUU CAUUGUCGU GAGGUG ACCU      A
AAAAUACAACAUCGUUCA   A^ GG      U         A      -    UUAACC 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-194-P2_5p
mirBase accessionMIMAT0048307
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
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Star sequence

Ocu-Mir-194-P2_3p*
mirBase accessionMIMAT0048308
Sequence 
36- CCAGUGGAGAUGCUGUUACUUU -58
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