MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-194
Paralogues
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 3: 18902602-18902657 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-194-P2 3: 18902602-18902657 [+] UCSC Ensembl
Mir-192-P2 3: 18902920-18902978 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUCAAGACAGACCACUGGUGCUCUCAUAUGUAACAGCAACUCCAUGUGGACUACACUGACUUCCAGUGGAGAUGCUGUUACUUUUGAUAGCGGCUCAAAGACUCCGGAUCAGCU
Get precursor sequence
Structure
        10         20         30        40        50        
CAUUCAAGACAGACCACU-  -|   C   UAU         A      G    CUACA 
                   GG UGCU UCA   GUAACAGCA CUCCAU UGGA     \
                   UC GCGA AGU   CAUUGUCGU GAGGUG ACCU     C
UCGACUAGGCCUCAGAAAC  G^   U   UUU         A      -    UCAGU 
    110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-194-P2_5p
mirBase accessionMIMAT0001133
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
Proposed targets TargetScanVert: gga-miR-194
miRDB: MIMAT0001133
Star sequence

Gga-Mir-194-P2_3p*
mirBase accessionNone
Sequence 
34- CCAGUGGAGAUGCUGUUACUUU -56
Get sequence