MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015252270.1: 164-219 [-]
Precursor
(pre-Mir +30nt flank)
AACAGAUGCUGUUCAAACAGUGCUGUCAAGUGUAACAGCAACUCCAUGUGGACAAGGCAAAUUUCCAGUGGAGGUGCUGUUACUUUUGAAGGCCACUGACCAGACUGGAAUAGAUA
Get precursor sequence
Structure
        10         20         30        40        50        
AACAGAUGCUGUUCAAA-    -|  G     U         A      G    CAAGG 
                  CAGU GCU UCAAG GUAACAGCA CUCCAU UGGA     \
                  GUCA CGG AGUUU CAUUGUCGU GAGGUG ACCU     C
AUAGAUAAGGUCAGACCA    C^  A     U         G      -    UUAAA 
    110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-194-P2_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
Star sequence

Gja-Mir-194-P2_3p*
mirBase accessionNone
Sequence 
34- CCAGUGGAGGUGCUGUUACUUU -56
Get sequence