MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-194-1
Paralogues Xtr-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr5: 6915468-6915523 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-194-P2 chr5: 6915468-6915523 [+] UCSC Ensembl
Mir-192-P2 chr5: 6916171-6916232 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGUAGAAGAGCCUAUAGUGUGUAUCAGGUGUAACAGCAACUCCAUGUGGACUUGUCCGUAUUCCAGUGGAGAUGCUGUUACUUUUGAUGGGCACUUACUGACCAGUGACAAGAG
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Structure
        10          20        30        40        50        
GGAGUAGAAGAGCCUAU--|    G       U         A      G    CUUGU 
                   AGUGU UAUCAGG GUAACAGCA CUCCAU UGGA     \
                   UCACG GUAGUUU CAUUGUCGU GAGGUG ACCU     C
GAGAACAGUGACCAGUCAU^    G       U         A      -    UAUGC 
    110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-194-P2_5p
mirBase accessionMIMAT0003617
Sequence 
0- UGUAACAGCAACUCCAUGUGGA -22
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Proposed targets TargetScanVert: xtr-miR-194
Star sequence

Xtr-Mir-194-P2_3p*
mirBase accessionNone
Sequence 
35- CAGUGGAGAUGCUGUUACUUU -56
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