| MirGeneDB ID | Pab-Mir-194-P2 |
|---|---|
| Family name | MIR-194 (all species) |
| Seed | GUAACAG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-194-P4 |
| Orthologues | Aca-Mir-194-P2 Ami-Mir-194-P2 Bta-Mir-194-P2 Cfa-Mir-194-P2 Cja-Mir-194-P2 Cli-Mir-194-P2 Cmi-Mir-194-P2 Cpi-Mir-194-P2 Eca-Mir-194-P2 Ete-Mir-194-P2 Gga-Mir-194-P2 Gja-Mir-194-P2 Hsa-Mir-194-P2 Laf-Mir-194-P2 Lch-Mir-194-P2 Mml-Mir-194-P2 Mmr-Mir-194-P2 Mmu-Mir-194-P2 Mun-Mir-194-P2 Oan-Mir-194-P2 Ocu-Mir-194-P2 Pbv-Mir-194-P2 Rno-Mir-194-P2 Spt-Mir-194-P2 Sto-Mir-194-P2 Tgu-Mir-194-P2 Xla-Mir-194-P2a Xla-Mir-194-P2b Xtr-Mir-194-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 29309947-29310004 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUCCUUAUAUGUUUAAUGGUGUUAUCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAUUUCCAGUGGAGAUGUUGUUACUUUUGAUGGUUACCAACUUGCUACAAUAUAAAGGet precursor sequence |
| Structure | 10 20 30 40 50 UCUCCUUAUAUGUUUAA- -|UU U A G CUGUGU UGGU G AUCAAG GUAACAGCA CUCCAU UGGA \ ACCA U UAGUUU CAUUGUUGU GAGGUG ACCU A GAAAUAUAACAUCGUUCA U^GG U A - UUAACC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-194-P2_5p |
| mirBase accession | None |
| Sequence |
0- UGUAACAGCAACUCCAUGUGGA -22
Get sequence
|
| Star sequence | Pab-Mir-194-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CCAGUGGAGAUGUUGUUACUUU -58
Get sequence
|
