MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-194-2
Paralogues Oan-Mir-194-P1 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cpi-Mir-194-P2  Cpo-Mir-194-P2  Dno-Mir-194-P2  Dre-Mir-194-P2a  Dre-Mir-194-P2b  Ete-Mir-194-P2  Gja-Mir-194-P2  Gmo-Mir-194-P2a  Gmo-Mir-194-P2b  Hsa-Mir-194-P2  Lch-Mir-194-P2  Loc-Mir-194-P2  Mal-Mir-194-P2a  Mal-Mir-194-P2b  Mml-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Ocu-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Sha-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tni-Mir-194-P2a  Tni-Mir-194-P2b  Xla-Mir-194-P2c  Xla-Mir-194-P2d  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041730.1: 7219904-7219961 [+]
Clustered miRNAs
(< 50kb from Mir-194-P2)
Mir-194-P2 NC_041730.1: 7219904-7219961 [+]
Mir-192-P2 NC_041730.1: 7220148-7220211 [+]
Precursor
(pre-Mir +30nt flank)
UCCGACGGCGCACUUGUGGAGCCCACCCCUUGUAACAGCAACUCCAUGUGGAAGGGUCUCCUGGUUCCAGUGGAGCUGCUGUUAUCUUGGGUGGGUCAUCCGGGAUCCUCGGAGGAAG
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Structure
        10           20        30        40        50         
UCCGACGGCGCACUUGUG---| G       CUU         A      G     GGGUC 
                     GA CCCACCC   GUAACAGCA CUCCAU UGGAA     \
                     CU GGGUGGG   UAUUGUCGU GAGGUG ACCUU     U
GAAGGAGGCUCCUAGGGCCUA^ -       UUC         C      -     GGUCC 
      110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-194-P2_5p

mirBase accessionMIMAT0006999
Sequence
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Oan-Mir-194-P2_3p*

mirBase accessionMIMAT0007018
Sequence
36- CCAGUGGAGCUGCUGUUAUCUU -58
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