| MirGeneDB ID | Spt-Mir-194-P2 |
|---|---|
| Family name | MIR-194 (all species) |
| Seed | GUAACAG |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-194-P1 |
| Orthologues | Aca-Mir-194-P2 Ami-Mir-194-P2 Bta-Mir-194-P2 Cfa-Mir-194-P2 Cpi-Mir-194-P2 Cpo-Mir-194-P2 Dno-Mir-194-P2 Dre-Mir-194-P2a Dre-Mir-194-P2b Ete-Mir-194-P2 Gja-Mir-194-P2 Gmo-Mir-194-P2a Gmo-Mir-194-P2b Hsa-Mir-194-P2 Lch-Mir-194-P2 Loc-Mir-194-P2 Mal-Mir-194-P2a Mal-Mir-194-P2b Mml-Mir-194-P2 Mmu-Mir-194-P2 Mun-Mir-194-P2 Oan-Mir-194-P2 Ocu-Mir-194-P2 Pbv-Mir-194-P2 Rno-Mir-194-P2 Sha-Mir-194-P2 Sto-Mir-194-P2 Tni-Mir-194-P2a Tni-Mir-194-P2b Xla-Mir-194-P2c Xla-Mir-194-P2d Xtr-Mir-194-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01015260.1: 384821-384880 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAUGUUUGCACAACUGGGGUGCUUAUCUGCUGUAACAGCAACUCCAUGUGGAAGUCUCUGGCCUGGUUCCAGUGGGGCGGCUGUUAUUUUGGAUGGGCACUCGGGAGCAUCAGAUGGGGCGet precursor sequence |
| Structure | 10 20 30 40 50 GAUGUUUGCACAACUGG--| CU AA G GUCUCU GGUGCUUAUCUG GUAACAGC CUCCAU UGGAA \ UCACGGGUAGGU UAUUGUCG GGGGUG ACCUU G CGGGGUAGACUACGAGGGC^ UU GC - GGUCCG . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Spt-Mir-194-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
|
| Star sequence | Spt-Mir-194-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- CCAGUGGGGCGGCUGUUAUUUU -60
Get sequence
|
