MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-194-1
Paralogues Mmu-Mir-194-P4 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Laf-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr1: 185313325-185313381 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P2)		 Mir-194-P2 chr1: 185313325-185313381 [+] UCSC Ensembl
Mir-192-P2 chr1: 185313610-185313668 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAUCCGGCAAACUGAUGGAGUCAUCGGGUGUAACAGCAACUCCAUGUGGACUGUGCUCGGAUUCCAGUGGAGCUGCUGUUACUUCUGAUGGCCUCCAACCGGCUACAAACAUGGA
Get precursor sequence
Structure
        10         20         30        40        50        
CCCAUCCGGCAAACUGA-    -|        U         A      G    CUGUG 
                  UGGA GUCAUCGGG GUAACAGCA CUCCAU UGGA     C
                  ACCU CGGUAGUCU CAUUGUCGU GAGGUG ACCU     U
AGGUACAAACAUCGGCCA    C^        U         C      -    UAGGC 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-194-P2_5p
mirBase accessionMIMAT0000224
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
Proposed targets microrna.org: MIMAT0000224
TargetScanVert: mmu-miR-194-5p
miRDB: MIMAT0000224
Star sequence

Mmu-Mir-194-P2_3p*
mirBase accessionMIMAT0016999
Sequence 
35- CCAGUGGAGCUGCUGUUACUUC -57
Get sequence
Proposed targets TargetScanVert: mmu-miR-194-1-3p
miRDB: MIMAT0016999