| MirGeneDB ID | Laf-Mir-194-P2 |
|---|---|
| Family name | MIR-194 (all species) |
| Seed | GUAACAG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-194-P1 |
| Orthologues | Aca-Mir-194-P2 Ami-Mir-194-P2 Bta-Mir-194-P2 Cfa-Mir-194-P2 Cja-Mir-194-P2 Cli-Mir-194-P2 Cmi-Mir-194-P2 Cpi-Mir-194-P2 Eca-Mir-194-P2 Ete-Mir-194-P2 Gga-Mir-194-P2 Gja-Mir-194-P2 Hsa-Mir-194-P2 Lch-Mir-194-P2 Mml-Mir-194-P2 Mmr-Mir-194-P2 Mmu-Mir-194-P2 Mun-Mir-194-P2 Oan-Mir-194-P2 Ocu-Mir-194-P2 Pab-Mir-194-P2 Pbv-Mir-194-P2 Rno-Mir-194-P2 Spt-Mir-194-P2 Sto-Mir-194-P2 Tgu-Mir-194-P2 Xla-Mir-194-P2a Xla-Mir-194-P2b Xtr-Mir-194-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010098.1: 4590894-4590951 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCCCAGGCUUCCAAUGGGCUCCCACCCCCUGUAACAGCAACUCCAUGUGGAAGUGCUUGCUGGUUCCAGUGGGGCUGCUGUUAUCUGGGGCGGGGGCCAGGACCCAUGGAGGAAGAGGet precursor sequence |
| Structure | 10 20 30 40 50 GGCCCAGGCUUCCAAUG--| A CU A G GUGCU GGCUCCC CCCC GUAACAGCA CUCCAU UGGAA \ CCGGGGG GGGG UAUUGUCGU GGGGUG ACCUU U GAGAAGGAGGUACCCAGGA^ C UC C - GGUCG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UGUG in loop |
| Mature sequence | Laf-Mir-194-P2_5p |
| mirBase accession | None |
| Sequence |
0- UGUAACAGCAACUCCAUGUGGAA -23
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|
| Star sequence | Laf-Mir-194-P2_3p* |
| mirBase accession | None |
| Sequence |
36- CCAGUGGGGCUGCUGUUAUCUG -58
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|
