MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-194-P2

Family name MIR-194 (all species)
Seed GUAACAG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-194-P1 
Orthologues Aca-Mir-194-P2  Ami-Mir-194-P2  Bta-Mir-194-P2  Cfa-Mir-194-P2  Cja-Mir-194-P2  Cli-Mir-194-P2  Cmi-Mir-194-P2  Cpi-Mir-194-P2  Eca-Mir-194-P2  Ete-Mir-194-P2  Gga-Mir-194-P2  Gja-Mir-194-P2  Hsa-Mir-194-P2  Lch-Mir-194-P2  Mml-Mir-194-P2  Mmr-Mir-194-P2  Mmu-Mir-194-P2  Mun-Mir-194-P2  Oan-Mir-194-P2  Ocu-Mir-194-P2  Pab-Mir-194-P2  Pbv-Mir-194-P2  Rno-Mir-194-P2  Spt-Mir-194-P2  Sto-Mir-194-P2  Tgu-Mir-194-P2  Xla-Mir-194-P2a  Xla-Mir-194-P2b  Xtr-Mir-194-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010098.1: 4590894-4590951 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCCAGGCUUCCAAUGGGCUCCCACCCCCUGUAACAGCAACUCCAUGUGGAAGUGCUUGCUGGUUCCAGUGGGGCUGCUGUUAUCUGGGGCGGGGGCCAGGACCCAUGGAGGAAGAG
Get precursor sequence
Structure
        10          20        30        40        50         
GGCCCAGGCUUCCAAUG--|      A    CU         A      G     GUGCU 
                   GGCUCCC CCCC  GUAACAGCA CUCCAU UGGAA     \
                   CCGGGGG GGGG  UAUUGUCGU GGGGUG ACCUU     U
GAGAAGGAGGUACCCAGGA^      C    UC         C      -     GGUCG 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-194-P2_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
Star sequence

Laf-Mir-194-P2_3p*
mirBase accessionNone
Sequence 
36- CCAGUGGGGCUGCUGUUAUCUG -58
Get sequence