MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-215
Paralogues Oan-Mir-192-P2-as  Oan-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041746.1: 8010939-8010997 [+]
Clustered miRNAs
(< 50kb from Mir-192-P2)
Mir-194-P2 NC_041746.1: 8009904-8009959 [+]
Mir-192-P2 NC_041746.1: 8010939-8010997 [+]
Precursor
(pre-Mir +30nt flank)
GCAAUCCAGGAAGAAAUGGUGUACAGGAAAAUGACCUAUGAAUUGACAGACAGUAUAUUUAGAUUGUCUGUCAUUUCUGUAGGCCAAAGUUCUGCAUGCCUUCACUGCUCCAGCGCCAG
Get precursor sequence
Structure
        10          20        30         40        50        
GCAAUCCAGGAAGAAAU--     A     AAA  A     -|  U         GUAUA 
                   GGUGU CAGGA   UG CCUAU GAA UGACAGACA     U
                   CCGUA GUCUU   AC GGAUG CUU ACUGUCUGU     U
GACCGCGACCUCGUCACUU     C     GAA  C     U^  U         UAGAU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-192-P2_5p

mirBase accessionMIMAT0007000
Sequence
0- AUGACCUAUGAAUUGACAGACA -22
Get sequence
Star sequence

Oan-Mir-192-P2_3p*

mirBase accessionMIMAT0007001
Sequence
36- UCUGUCAUUUCUGUAGGCCAAAG -59
Get sequence