MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-192-P4

Family name MIR-192 (all species)
Seed UGACCUA
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-192
Paralogues Xtr-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Tni-Mir-192-P4b-v2  Xla-Mir-192-P4c  Xla-Mir-192-P4d 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr4: 38493655-38493715 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4)		 Mir-194-P4 chr4: 38492078-38492136 [+] UCSC Ensembl
Mir-192-P4 chr4: 38493655-38493715 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACAGAGAGAUAAAGAGAGUGUACGGGCCUAUGACCUAUGAAUUGACAGCCAGUGGAUGUGAAGUCUGCCUGUCAAUUCUGUAGGCCACAGGUUCGUCCACCUUGUUGCGAUAACAAAGAG
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Structure
        10          20        30         40        50         
AACAGAGAGAUAAAGAGA--   U        A  A     -|         C  GUGGAU 
                    GUG ACGGGCCU UG CCUAU GAAUUGACAG CA      G
                    CAC UGCUUGGA AC GGAUG CUUAACUGUC GU      U
GAGAAACAAUAGCGUUGUUC   C        C  C     U^         C  CUGAAG 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-192-P4_5p
mirBase accessionMIMAT0003615
Sequence 
0- AUGACCUAUGAAUUGACAGCCA -22
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Proposed targets TargetScanVert: xtr-miR-192
Star sequence

Xtr-Mir-192-P4_3p*
mirBase accessionNone
Sequence 
38- CCUGUCAAUUCUGUAGGCCACAG -61
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