MirGeneDB ID | Mun-Let-7-P2a4 |
Family name |
LET-7 (all species) |
Seed |
GAGGUAG |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
Mun-Let-7-P1b
Mun-Let-7-P1c
Mun-Let-7-P1d
Mun-Let-7-P2a1
Mun-Let-7-P2a2
Mun-Let-7-P2a3
Mun-Let-7-P2b1
Mun-Let-7-P2b2
Mun-Let-7-P2b3
Mun-Let-7-P2b4
Mun-Let-7-P2c1
Mun-Let-7-P2c2
Mun-Let-7-P2c3
Mun-Let-7-P2c4
|
Orthologues |
Aae-Let-7
Aca-Let-7-P2a4
Ami-Let-7-P2a4
Bge-Let-7
Bpl-Let-7
Cgi-Let-7
Cli-Let-7-P2a4
Cmi-Let-7-P2a4
Cpi-Let-7-P2a4
Cte-Let-7
Dan-Let-7
Dma-Let-7
Dme-Let-7
Dmo-Let-7
Dpu-Let-7
Dre-Let-7-P2a4a
Dre-Let-7-P2a4b
Dsi-Let-7
Dya-Let-7
Esc-Let-7
Gga-Let-7-P2a4
Gja-Let-7-P2a4
Gmo-Let-7-P2a4a
Gmo-Let-7-P2a4b
Hme-Let-7
Isc-Let-7
Lan-Let-7
Lch-Let-7-P2a4
Lgi-Let-7
Loc-Let-7-P2a4
Mal-Let-7-P2a4a
Mal-Let-7-P2a4b
Npo-Let-7
Oan-Let-7-P2a4
Obi-Let-7
Ovu-Let-7
Pbv-Let-7-P2a4
Pfl-Let-7
Pmi-Let-7
Sko-Let-7
Spt-Let-7-P2a4
Spu-Let-7
Tca-Let-7
Tgu-Let-7-P2a4
Tni-Let-7-P2a4a
Tni-Let-7-P2a4b
Xbo-Let-7
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (Mun_miRNA_loci) |
Let-7-P2a4_LR594643.1:19231520-19231650: 31-101 [-]
|
Precursor (pre-Mir +30nt flank) |
CAGCCGUAGUAUUUCUGCUGUACUUGAGGAUGAGGUAGUAGAUUGAAUAGUUGUGGAGUUCUUCUCUCCCUUUGAGCUAACUAUACAAUCUACUGUCUUUCCUCCGGAGACGGUCGUUCAGCACAAGGGAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAGCCGUAGUAUUUCUG- A --| U GU A GUGGAGUUCUUC
CUGU CUU GAGGA GAG AGUAGAUUG AUAGUU U
GGCA GAG CUCCU UUC UCAUCUAAC UAUCAA C
AAGGGAACACGACUUGCU - GC^ - UG A UCGAGUUUCCCU
. 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Mun-Let-7-P2a4_5p |
mirBase accession | None |
Sequence |
0- UGAGGUAGUAGAUUGAAUAGUU -22
Get sequence
|
Star sequence |
Mun-Let-7-P2a4_3p* |
mirBase accession | None |
Sequence |
50- CUAUACAAUCUACUGUCUUUC -71
Get sequence
|