MirGeneDB 2.1

MirGeneDB ID

Mun-Let-7-P2c3

Family name LET-7 (all species)
Seed GAGGUAG
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Let-7-P1b  Mun-Let-7-P1c  Mun-Let-7-P1d  Mun-Let-7-P2a1  Mun-Let-7-P2a2  Mun-Let-7-P2a3  Mun-Let-7-P2a4  Mun-Let-7-P2b1  Mun-Let-7-P2b2  Mun-Let-7-P2b3  Mun-Let-7-P2b4  Mun-Let-7-P2c1  Mun-Let-7-P2c2  Mun-Let-7-P2c4 
Orthologues Aae-Let-7  Aca-Let-7-P2c3  Ami-Let-7-P2c3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2c3  Cfa-Let-7-P2c3  Cgi-Let-7  Cli-Let-7-P2c3  Cmi-Let-7-P2c3  Cpi-Let-7-P2c3  Cpo-Let-7-P2c3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2c3  Dpu-Let-7  Dre-Let-7-P2c3  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2c3  Gga-Let-7-P2c3  Gja-Let-7-P2c3  Gmo-Let-7-P2c3  Hme-Let-7  Hsa-Let-7-P2c3  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2c3  Lgi-Let-7  Loc-Let-7-P2c3  Mal-Let-7-P2c3  Mdo-Let-7-P2c3  Mml-Let-7-P2c3  Mmu-Let-7-P2c3  Npo-Let-7  Oan-Let-7-P2c3  Obi-Let-7  Ocu-Let-7-P2c3  Ovu-Let-7  Pbv-Let-7-P2c3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2c3  Sha-Let-7-P2c3  Sko-Let-7  Spt-Let-7-P2c3  Spu-Let-7  Sto-Let-7-P2c3  Tca-Let-7  Tgu-Let-7-P2c3  Tni-Let-7-P2c3  Xbo-Let-7  Xla-Let-7-P2c3c  Xla-Let-7-P2c3d  Xtr-Let-7-P2c3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Mun_miRNA_loci)
Let-7-P2c3_LR594637.1:179355219-179355342: 24-101 [-]
Precursor
(pre-Mir +30nt flank)
UGAGGUAGUAGUUUGUACAGUUUGAGGGUCUACGAUACCACCCGGUACUGGAGAUAACUGUACAGGCCACUGCCUUGC
Get precursor sequence
Structure
         10        20        30        40 
U-|       A            UGAGG    A  A    A 
  GAGGUAGU GUUUGUACAGUU     GUCU CG UACC C
  UUCCGUCA CGGACAUGUCAA     UAGA GU AUGG C
CG^       C            -----    G  C    C 
       70        60             50
Deep sequencing
3' NTU Yes
MotifsNo
Mature sequence

Mun-Let-7-P2c3_5p

mirBase accessionNone
Sequence
0- UGAGGUAGUAGUUUGUACAGUU -22
Get sequence
Star sequence

Mun-Let-7-P2c3_3p*

mirBase accessionNone
Sequence
57- CUGUACAGGCCACUGCCUUGC -78
Get sequence