MirGeneDB 3.0
MirGeneDB ID

Ocu-Let-7-P2c3

Family name LET-7 (all species)
Seed GAGGUAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-let-7g
Paralogues Ocu-Let-7-P1b  Ocu-Let-7-P1c  Ocu-Let-7-P1d  Ocu-Let-7-P2a1  Ocu-Let-7-P2a2  Ocu-Let-7-P2a3  Ocu-Let-7-P2b1  Ocu-Let-7-P2b2  Ocu-Let-7-P2b3  Ocu-Let-7-P2c1  Ocu-Let-7-P2c2 
Orthologues Aae-Let-7  Aca-Let-7-P2c3  Aga-Let-7  Agr-Let-7  Ami-Let-7-P2c3  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Bta-Let-7-P2c3  Cfa-Let-7-P2c3  Cja-Let-7-P2c3  Cli-Let-7-P2c3  Cmi-Let-7-P2c3  Cpi-Let-7-P2c3  Cpo-Let-7-P2c3  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2c3  Dpu-Let-7  Dre-Let-7-P2c3  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Eca-Let-7-P2c3  Egr-Let-7  Esc-Let-7  Ete-Let-7-P2c3  Gga-Let-7-P2c3  Gja-Let-7-P2c3  Gmo-Let-7-P2c3  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Hsa-Let-7-P2c3  Isc-Let-7  Laf-Let-7-P2c3  Lan-Let-7  Lch-Let-7-P2c3  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Loc-Let-7-P2c3  Mal-Let-7-P2c3  Mdo-Let-7-P2c3  Mgi-Let-7  Mml-Let-7-P2c3  Mmr-Let-7-P2c3  Mmu-Let-7-P2c3  Mom-Let-7  Mun-Let-7-P2c3  Npo-Let-7  Oan-Let-7-P2c3  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pab-Let-7-P2c3  Pau-Let-7  Pbv-Let-7-P2c3  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rno-Let-7-P2c3  Rph-Let-7  Sha-Let-7-P2c3  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spt-Let-7-P2c3  Spu-Let-7  Sro-Let-7  Sto-Let-7-P2c3  Tca-Let-7  Tgu-Let-7-P2c3  Tni-Let-7-P2c3  Tur-Let-7  War-Let-7  Xbo-Let-7  Xla-Let-7-P2c3c  Xla-Let-7-P2c3d  Xtr-Let-7-P2c3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(oryCun2_add)		 chr9: 19340307-19340384 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Let-7-P2c3)		 Let-7-P2c3 chr9: 19340307-19340384 [-] UCSC Ensembl
Mir-135-P1 chr9: 19378424-19378483 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCUCCGUUUCCUUUUGCCUGAUUCCAGGCUGAGGUAGUAGUUUGUACAGUUUGAGGGUCUAUGAUACCACCCGGUACAGGAGAUAACUGUACAGGCCACUGCCUUGCCAGGAACAGUGCGACAGCUACCAAGUGGGG
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Structure
        10           20        30        40        50        60         
CGCUCCGUUUCCUUUUGC---|  A    A   U        A            UGAGGGUCUAUGAUAC 
                     CUG UUCC GGC GAGGUAGU GUUUGUACAGUU                \
                     GAC AAGG CCG UUCCGUCA CGGACAUGUCAA                C
GGGGUGAACCAUCGACAGCGU^  -    A   -        C            UAGAGGACAUGGCCCA 
      130       120        110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Let-7-P2c3_5p
mirBase accessionMIMAT0048087
Sequence 
0- UGAGGUAGUAGUUUGUACAGUU -22
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Star sequence

Ocu-Let-7-P2c3_3p*
mirBase accessionMIMAT0048088
Sequence 
57- CUGUACAGGCCACUGCCUUGC -78
Get sequence