MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-1249

Family name MIR-1249 (all species)
Seed CGCCCUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-1249
Paralogues
Orthologues Cfa-Mir-1249  Cja-Mir-1249  Cpo-Mir-1249  Dno-Mir-1249  Eca-Mir-1249  Ete-Mir-1249  Hsa-Mir-1249  Laf-Mir-1249  Mml-Mir-1249  Mmr-Mir-1249  Mmu-Mir-1249  Ocu-Mir-1249  Pab-Mir-1249  Rno-Mir-1249 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037332.1: 115620095-115620153 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGUUCCUCAGAUUCUUGUUUGCAUGGGGAGGAGGGAGGAGAUGGGCCACGUUCCCUCUGCCUGGAACGCCCUUCCCCCCCUUCUUCACCUAGCGAACUCCUACUCGUCCUUCAAGAC
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Structure
        10          20         30        40        50        60
CUUGUUCCUCAGAUUCUU--|     A    -        A  A  U    CAC    CCUC 
                    GUUUGC UGGG GAGGAGGG GG GA GGGC   GUUC    U
                    CAAGCG AUCC CUUCUUCC CC CU CCCG   CAAG    G
CAGAACUUCCUGCUCAUCCU^     -    A        C  C  U    ---    GUCC 
       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-1249_5p*
mirBase accessionNone
Sequence 
0- AGGAGGGAGGAGAUGGGCCACGUUC -25
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Mature sequence

Bta-Mir-1249_3p
mirBase accessionMIMAT0009976
Sequence 
37- ACGCCCUUCCCCCCCUUCUUCA -59
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Proposed targets TargetScanVert: bta-miR-1249