MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-1249

Family name MIR-1249 (all species)
Seed CGCCCUU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-1249
Paralogues
Orthologues Bta-Mir-1249  Cfa-Mir-1249  Cpo-Mir-1249  Dno-Mir-1249  Ete-Mir-1249  Hsa-Mir-1249  Mml-Mir-1249  Ocu-Mir-1249  Rno-Mir-1249 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr15: 84951545-84951603 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGCUGCUCCGAUUCUUGUUUGCGUGGGGAGGAGGGAGGGGAUGGGCCAAGUUCCCUAUGCCUGGAACGCCCUUCCCCCCCUUCUUCACCUGGCGAACUCCUACUCGUCCUUCAAGAC
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Structure
        10          20         30        40        50        60
CUUGCUGCUCCGAUUCUU--      GU  -|        A     U    CAA    CCUA 
                    GUUUGC  GG GGAGGAGGG GGGGA GGGC   GUUC    U
                    CAAGCG  CC CUUCUUCCC CCCCU CCCG   CAAG    G
CAGAACUUCCUGCUCAUCCU      GU  A^        -     U    ---    GUCC 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Mmu-Mir-1249_5p*

mirBase accessionMIMAT0014804
Sequence
0- AGGAGGGAGGGGAUGGGCCAAGUUC -25
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Proposed targets TargetScanVert: mmu-miR-1249-5p
miRDB: MIMAT0014804
Mature sequence

Mmu-Mir-1249_3p

mirBase accessionMIMAT0010560
Sequence
37- ACGCCCUUCCCCCCCUUCUUCA -59
Get sequence
Proposed targets TargetScanVert: mmu-miR-1249-3p
miRDB: MIMAT0010560