| MirGeneDB ID | Laf-Mir-1249 |
|---|---|
| Family name | MIR-1249 (all species) |
| Seed | CGCCCUU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-1249 Cfa-Mir-1249 Cja-Mir-1249 Cpo-Mir-1249 Dno-Mir-1249 Eca-Mir-1249 Ete-Mir-1249 Hsa-Mir-1249 Mml-Mir-1249 Mmr-Mir-1249 Mmu-Mir-1249 Ocu-Mir-1249 Pab-Mir-1249 Rno-Mir-1249 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010129.1: 324783-324840 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUUGUUCCGCAGAUUCUUGUUUGCGUGGGGAGGAGGGAGGAGAUGGGCCAAGUUCCCUCUGCCUGGAACGCCCUUCCCCCCCUUCUUCACCUGGCGAACUCCUACUCGUCCUUCAAGAGet precursor sequence |
| Structure | 10 20 30 40 50 CUUGUUCCGCAGAUUCUU- GU -| A A U CAAGUUCCCU GUUUGC GG GGAGGAGGG GG GA GGGC \ CAAGCG CC CUUCUUCCC CC CU CCCG C AGAACUUCCUGCUCAUCCU GU A^ - C U CAAGGUCCGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Laf-Mir-1249_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGAGGGAGGAGAUGGGCCAAG -22
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|
| Mature sequence | Laf-Mir-1249_3p |
| mirBase accession | None |
| Sequence |
37- ACGCCCUUCCCCCCCUUCUUC -58
Get sequence
|
