| MirGeneDB ID | Mml-Mir-1249 |
|---|
| Family name |
MIR-1249 (all species) |
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| Seed |
CGCCCUU |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-1249
|
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| Paralogues |
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| Orthologues |
Bta-Mir-1249
Cfa-Mir-1249
Cpo-Mir-1249
Dno-Mir-1249
Ete-Mir-1249
Hsa-Mir-1249
Mmu-Mir-1249
Ocu-Mir-1249
Rno-Mir-1249
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(rheMac8_trace) |
chr10: 87337504-87337562 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCUGCUCCUCAGAUUCUUGUUGGCAUGGGGAGGAGGGAGGAGAUGGGCCAAGUUCCCUCUGGCUGGAACGCCCUUCCCCCCCUUCUUCACCUGGCGAACUCCUACUCGUCCUUCAAGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCUGCUCCUCAGAUUCUU-- G AU -| A A U CAA CCUC
GUU GC GG GGAGGAGGG GG GA GGGC GUUC U
CAA CG CC CUUCUUCCC CC CU CCCG CAAG G
CAGAACUUCCUGCUCAUCCU G GU A^ - C U --- GUCG
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-1249_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGAGGGAGGAGAUGGGCCAAGUUC -25
Get sequence
|
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| Mature sequence |
Mml-Mir-1249_3p |
| mirBase accession | MIMAT0024324 |
|---|
| Sequence |
37- ACGCCCUUCCCCCCCUUCUUCA -59
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mml-miR-1249
|
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