MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-484

Family name MIR-484 (all species)
Seed CAGGCUC
Species Cow (Bos taurus)
MiRBase ID bta-mir-484
Paralogues
Orthologues Cfa-Mir-484  Cja-Mir-484  Dno-Mir-484  Eca-Mir-484  Hsa-Mir-484  Laf-Mir-484  Mml-Mir-484  Mmr-Mir-484-P1  Mmr-Mir-484-P2  Mmu-Mir-484  Ocu-Mir-484  Pab-Mir-484  Rno-Mir-484 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037352.1: 14083761-14083817 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUCCCCGCGCGGGGCGUGCUGGGAACCCCGGGGGGGGCGGGGCCUCGCGGCCCUGCAGCCUCGUCAGGCUCAGUCCCCUCCCGAUAAACCUCUAAAUAGGGACCUUCCCGGGGGG
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Structure
        10        20          30         40        50       
UCCUCCCCGCGCGGGGCGUGCU--   AACCC    -|     G      C   GCCCU 
                        GGG     CGGG GGGGGC GGGCCU GCG     G
                        UCC     GCCC CCCCUG CUCGGA UGC     C
GGGGGGCCCUUCCAGGGAUAAAUC   AAAUA    U^     A      C   UCCGA 
     110       100        90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. Mirbase has the wrong end annoated as the mature arm (Babiarz et al. 2008).
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-484_5p* (predicted)
mirBase accessionMIMAT0003535
Sequence 
0- CGGGGGGGGCGGGGCCUCGCG -21
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Proposed targets TargetScanVert: bta-miR-484
Mature sequence

Bta-Mir-484_3p
mirBase accessionNone
Sequence 
35- UCAGGCUCAGUCCCCUCCCGAU -57
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