MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-484

Family name MIR-484 (all species)
Seed CAGGCUC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-484
Paralogues
Orthologues Bta-Mir-484  Cfa-Mir-484  Cja-Mir-484  Dno-Mir-484  Eca-Mir-484  Hsa-Mir-484  Laf-Mir-484  Mml-Mir-484  Mmr-Mir-484-P1  Mmr-Mir-484-P2  Ocu-Mir-484  Pab-Mir-484  Rno-Mir-484 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr16: 14159595-14159651 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAUUUCUCCGCGCAGGGCACGCUGGGAAGUGGGGGGGGCGGGGCCUCGCGGCCCUGCAGCCUCGUCAGGCUCAGUCCCCUCCCGAUAAACCUCAAAAUAGGGUCUUACCUAGGGGG
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Structure
        10        20         30          40        50       
GUAUUUCUCCGCGCAGGGCACGCU-  GAAG-    -|     G      C   GCCCU 
                         GG     UGGG GGGGGC GGGCCU GCG     G
                         CC     GCCC CCCCUG CUCGGA UGC     C
GGGGGAUCCAUUCUGGGAUAAAACU  AAAUA    U^     A      C   UCCGA 
     110       100        90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. Mirbase has the wrong end annoated as the mature arm (Babiarz et al. 2008).
3' NTU No
MotifsNo
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-484_5p* (predicted)

mirBase accessionMIMAT0003127
Sequence
0- UGGGGGGGGCGGGGCCUCGCG -21
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Proposed targets microrna.org: MIMAT0003127
TargetScanVert: mmu-miR-484
miRDB: MIMAT0003127
Mature sequence

Mmu-Mir-484_3p

mirBase accessionNone
Sequence
35- UCAGGCUCAGUCCCCUCCCGAU -57
Get sequence