MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-484

Family name MIR-484 (all species)
Seed CAGGCUC
Species Horse (Equus caballus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-484  Cfa-Mir-484  Cja-Mir-484  Dno-Mir-484  Hsa-Mir-484  Laf-Mir-484  Mml-Mir-484  Mmr-Mir-484-P1  Mmr-Mir-484-P2  Mmu-Mir-484  Ocu-Mir-484  Pab-Mir-484  Rno-Mir-484 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009160.1: 31171357-31171413 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUCCCCGCGCGGGGCGUGCUGGGAACCCCGGGGGGGGCGGGGCCUCGCGGCCCUGCAGCCUCGUCAGGCUCAGUCCCCUCCCGAUAAACCCCUAAAUAGGGACCUUCCCGGGGCG
Get precursor sequence
Structure
        10        20          30         40        50       
UCCUCCCCGCGCGGGGCGUGCU--   AACCC    -|     G      C   GCCCU 
                        GGG     CGGG GGGGGC GGGCCU GCG     G
                        CCC     GCCC CCCCUG CUCGGA UGC     C
GCGGGGCCCUUCCAGGGAUAAAUC   AAAUA    U^     A      C   UCCGA 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. Mirbase has the wrong end annoated as the mature arm (Babiarz et al. 2008).
3' NTU No
MotifsNo
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-484_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGGGGGGGGCGGGGCCUCGCG -21
Get sequence
Mature sequence

Eca-Mir-484_3p
mirBase accessionNone
Sequence 
35- UCAGGCUCAGUCCCCUCCCGAU -57
Get sequence