MirGeneDB ID | Mml-Mir-484 |
Family name |
MIR-484 (all species) |
Seed |
CAGGCUC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-484
|
Paralogues |
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Orthologues |
Bta-Mir-484
Cfa-Mir-484
Cja-Mir-484
Dno-Mir-484
Eca-Mir-484
Hsa-Mir-484
Laf-Mir-484
Mmr-Mir-484-P1
Mmr-Mir-484-P2
Mmu-Mir-484
Ocu-Mir-484
Pab-Mir-484
Rno-Mir-484
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014355.1: 15223422-15223478 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCCUGUCCGCGCGGGGCAUGCUGGGAACCCCGGGGGGGGCGGGGCCUCGCGGCCCUGCAGCCUCGUCAGGCUCAGUCCCCUCCCGAUAAACCCCUAAAUAGGGACUUUCCCGGGGGG
Get precursor sequence
|
Structure | 10 20 30 40 50
UCCUGUCCGCGCGGGGCAUGCU-- AACCC -| G C GCCCU
GGG CGGG GGGGGC GGGCCU GCG G
CCC GCCC CCCCUG CUCGGA UGC C
GGGGGGCCCUUUCAGGGAUAAAUC AAAUA U^ A C UCCGA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | As a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. Mirbase has the wrong end annoated as the mature arm (Babiarz et al. 2008). |
3' NTU |
No
|
Motifs | No |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-484_5p* (predicted) |
mirBase accession | MIMAT0006341 |
Sequence |
0- CGGGGGGGGCGGGGCCUCGCG -21
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-484
|
Mature sequence |
Mml-Mir-484_3p |
mirBase accession | None |
Sequence |
35- UCAGGCUCAGUCCCCUCCCGAU -57
Get sequence
|