MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-484

Family name MIR-484 (all species)
Seed CAGGCUC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-484  Cfa-Mir-484  Cja-Mir-484  Dno-Mir-484  Eca-Mir-484  Hsa-Mir-484  Mml-Mir-484  Mmr-Mir-484-P1  Mmr-Mir-484-P2  Mmu-Mir-484  Ocu-Mir-484  Pab-Mir-484  Rno-Mir-484 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010151.1: 1822007-1822063 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUCCCCGCGCGGGGUGUGCUGGGAACCCUGGGGGGGGCGGGGCCUCGCGGCCCUGCAGCCUCGUCAGGCUCAGUCCCCUCCCGAUAAAACCCUAAAUAGGGACCUUCCAUGGGGG
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Structure
        10        20         30          40        50       
UCCUCCCCGCGCGGGGUGUGCU-   AACCC-    -|     G      C   GCCCU 
                       GGG      UGGG GGGGGC GGGCCU GCG     G
                       CCC      GCCC CCCCUG CUCGGA UGC     C
GGGGGUACCUUCCAGGGAUAAAU   AAAAUA    U^     A      C   UCCGA 
     110       100        90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. Mirbase has the wrong end annoated as the mature arm (Babiarz et al. 2008).
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-484_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGGGGGGGCGGGGCCUCGCG -21
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Mature sequence

Laf-Mir-484_3p
mirBase accessionNone
Sequence 
35- UCAGGCUCAGUCCCCUCCCGAU -57
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