MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-484-P1

Family name MIR-484 (all species)
Seed CAGGCUC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-484
Paralogues Mmr-Mir-484-P2 
Orthologues Bta-Mir-484  Cfa-Mir-484  Cja-Mir-484  Dno-Mir-484  Eca-Mir-484  Hsa-Mir-484  Laf-Mir-484  Mml-Mir-484  Mmu-Mir-484  Ocu-Mir-484  Pab-Mir-484  Rno-Mir-484 
Node of Origin (locus) M. murinus
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007677.1: 16041471-16041527 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCCUCCCCGCGCGGGGCAGGCUGGGAACUCGGGGGGGGCGGGGCCUCGCGGCCCUGCAGCCUCGUCAGGCUCAGUCCCCUCCCGAUAAACCCCUAAAUAGCGACUUUCCCGGGGGG
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Structure
        10            20        30         40        50       
GUCCUCCCCGCGCGGGGC----|  CU  GAAC     -      G      C   GCCCU 
                      AGG  GG    UCGGG GGGGGC GGGCCU GCG     G
                      UCC  CC    AGCCC CCCCUG CUCGGA UGC     C
GGGGGGCCCUUUCAGCGAUAAA^  --  AAAU     U      A      C   UCCGA 
     110       100          90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. Mirbase has the wrong end annoated as the mature arm (Babiarz et al. 2008).
3' NTU No
MotifsNo
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-484-P1_5p* (predicted)
mirBase accessionMIMAT0049230
Sequence 
0- CGGGGGGGGCGGGGCCUCGCG -21
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Mature sequence

Mmr-Mir-484-P1_3p
mirBase accessionNone
Sequence 
35- UCAGGCUCAGUCCCCUCCCGAU -57
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