MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-486

Family name MIR-486 (all species)
Seed CCUGUAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-486
Paralogues
Orthologues Bta-Mir-486  Cja-Mir-486  Cpo-Mir-486  Dno-Mir-486  Eca-Mir-486  Ete-Mir-486  Hsa-Mir-486  Laf-Mir-486  Mml-Mir-486  Mml-Mir-486-as  Mmr-Mir-486  Mmu-Mir-486  Ocu-Mir-486  Pab-Mir-486  Rno-Mir-486 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr16: 23958965-23959028 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGCUCUGACCUCCAUCCUCCCUGAGGGAUCCUGUACUGAGCUGCCCCGAGGCCAUUCACUGCGCUCAGCUCGGGGCAGCUCAGUACAGGAUGCGUCGGGGUGGGAGUCAGCAGGAAGCAAGG
Get precursor sequence
Structure
        10          20        30        40        50        60 
CCAGCUCUGACCUCCAU--| U      GGG                       GCCAUUCA 
                   CC CCCUGA   AUCCUGUACUGAGCUGCCCCGAG        C
                   GG GGGGCU   UAGGACAUGACUCGACGGGGCUC        U
GGAACGAAGGACGACUGAG^ U      GCG                       GACUCGCG 
  120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentMir-486 is palindromic. This orientation is 5'-3' with respect to the host gene, as well as rabbit and cow where the mature and star sequences differ. This orientation is the reverse compliment to what is submitted in miRBase.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-486_5p
mirBase accessionMIMAT0011132
Sequence 
0- UCCUGUACUGAGCUGCCCCGAG -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-486
miRDB: MIMAT0011132
Star sequence

Cfa-Mir-486_3p*
mirBase accessionMIMAT0032036
Sequence 
42- CGGGGCAGCUCAGUACAGGAUG -64
Get sequence
Proposed targets TargetScanVert: cfa-miR-486-3p
miRDB: MIMAT0032036