MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-486

Family name MIR-486 (all species)
Seed CCUGUAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-486-1
Paralogues
Orthologues Bta-Mir-486  Cfa-Mir-486  Cja-Mir-486  Cpo-Mir-486  Dno-Mir-486  Eca-Mir-486  Ete-Mir-486  Laf-Mir-486  Mml-Mir-486  Mml-Mir-486-as  Mmr-Mir-486  Mmu-Mir-486  Ocu-Mir-486  Pab-Mir-486  Rno-Mir-486 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr8: 41660442-41660505 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGCUCUGAUCUCCAUCCUCCCUGGGGCAUCCUGUACUGAGCUGCCCCGAGGCCCUUCAUGCUGCCCAGCUCGGGGCAGCUCAGUACAGGAUACCUCGGGGUGGGAGUCAGCAGGAGGUGAGG
Get precursor sequence
Structure
        10          20        30        40        50        60 
CCGGCUCUGAUCUCCAU--| U        C                       GCCCUUCA 
                   CC CCCUGGGG AUCCUGUACUGAGCUGCCCCGAG        U
                   GG GGGGCUCC UAGGACAUGACUCGACGGGGCUC        G
GGAGUGGAGGACGACUGAG^ U        A                       GACCCGUC 
  120       110       100        90        80        70
Deep sequencing
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CommentMir-486 is palindromic. This orientation is 5'-3' with respect to the host gene, as well as rabbit and cow where the mature and star sequences differ.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-486_5p

mirBase accessionMIMAT0002177
Sequence
0- UCCUGUACUGAGCUGCCCCGAG -22
Get sequence
Proposed targets microrna.org: MIMAT0002177
TargetScanVert: hsa-miR-486-5p
TargetMiner: hsa-miR-486-5p
miRDB: MIMAT0002177
Star sequence

Hsa-Mir-486_3p*

mirBase accessionMIMAT0004762
Sequence
42- CGGGGCAGCUCAGUACAGGAUA -64
Get sequence
Proposed targets microrna.org: MIMAT0004762
TargetScanVert: hsa-miR-486-3p
TargetMiner: hsa-miR-486-3p
miRDB: MIMAT0004762