MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-486

Family name MIR-486 (all species)
Seed CCUGUAC
Species Horse (Equus caballus)
MiRBase ID eca-mir-486
Paralogues
Orthologues Bta-Mir-486  Cfa-Mir-486  Cja-Mir-486  Cpo-Mir-486  Dno-Mir-486  Ete-Mir-486  Hsa-Mir-486  Laf-Mir-486  Mml-Mir-486  Mml-Mir-486-as  Mmr-Mir-486  Mmu-Mir-486  Ocu-Mir-486  Pab-Mir-486  Rno-Mir-486 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009174.1: 3721487-3721550 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGCUCUGACCUCCGUCCUCCCUGAGGGAUCCUGUACUGAGCUGCCCCGAGGCCCUUCACUGUGCCCAGCUCGGGGCAGCUCAGUACAGGAUGCGUCGGGGUGGGAGUCGGCAGGAAGUGGGG
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Structure
        10          20        30        40        50        60 
CCAGCUCUGACCUCCGU--| U      GGG                       GCCCUUCA 
                   CC CCCUGA   AUCCUGUACUGAGCUGCCCCGAG        C
                   GG GGGGCU   UAGGACAUGACUCGACGGGGCUC        U
GGGGUGAAGGACGGCUGAG^ U      GCG                       GACCCGUG 
  120       110       100        90        80        70
Deep sequencing
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CommentMir-486 is palindromic. This orientation is 5'-3' with respect to the host gene, as well as rabbit and cow where the mature and star sequences differ. This orientation is the reverse compliment to what is submitted in miRBase.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-486_5p
mirBase accessionMIMAT0013186
Sequence 
0- UCCUGUACUGAGCUGCCCCGAG -22
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Star sequence

Eca-Mir-486_3p*
mirBase accessionMIMAT0013187
Sequence 
42- CGGGGCAGCUCAGUACAGGAUG -64
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